BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB015E07SP1|AL426861
(996 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1370 817 0.0
3x_Contig1764 101 3e-21
>3x_Contig1370
Length = 5848
Score = 817 bits (412), Expect = 0.0
Identities = 412/412 (100%)
Strand = Plus / Plus
Query: 1 atctaccggacctaaactcagccaaaacccaatcacgctcgttctgagccttgtcaccgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5433 atctaccggacctaaactcagccaaaacccaatcacgctcgttctgagccttgtcaccgt 5492
Query: 61 gaatggccaaagctggccagccttcagttctcaaataagaagtgatctcatcacaagttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5493 gaatggccaaagctggccagccttcagttctcaaataagaagtgatctcatcacaagttc 5552
Query: 121 tcttagtggaagcaaaaatgatgatcttggagtcttgatcttgagaagcggtttccaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5553 tcttagtggaagcaaaaatgatgatcttggagtcttgatcttgagaagcggtttccaaat 5612
Query: 181 gcttggccaatctatctctcttttcgaaatcagtaaggacttcgacgatctgagtgattg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5613 gcttggccaatctatctctcttttcgaaatcagtaaggacttcgacgatctgagtgattg 5672
Query: 241 tgtgggatgcagacaattccaaagaaccaatttgaacttgaattggatcatgcaaatagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5673 tgtgggatgcagacaattccaaagaaccaatttgaacttgaattggatcatgcaaatagt 5732
Query: 301 cacttgccaattgtttaacttcctttggccaagtagcggaccacatcaaagtttgtctat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5733 cacttgccaattgtttaacttcctttggccaagtagcggaccacatcaaagtttgtctat 5792
Query: 361 caggtctaatttgatcgacaatttttctgatttgaggttcgaaacccatatc 412
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5793 caggtctaatttgatcgacaatttttctgatttgaggttcgaaacccatatc 5844
>3x_Contig1764
Length = 22510
Score = 101 bits (51), Expect = 3e-21
Identities = 57/59 (96%)
Strand = Plus / Minus
Query: 378 acaatttttctgatttgaggttcgaaacccatatccaacattctatcagcttcatccaa 436
|||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14539 acaattctcctgatttgaggttcgaaacccatatccaacattctatcagcttcatccaa 14481
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8036
Number of Sequences: 1807
Number of extensions: 8036
Number of successful extensions: 59
Number of sequences better than 1.0e-20: 2
length of query: 996
length of database: 10,358,551
effective HSP length: 16
effective length of query: 980
effective length of database: 10,329,639
effective search space: 10123046220
effective search space used: 10123046220
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)